Basic Information
Locus ID:
gene-LOC132635843
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 34383059 | 34387662 | + | gene-LOC132635843 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 114,959.88 Da | 38.44 | 101.18 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 77 | 8.4E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 701 | 975 | 6.5E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 105 | 164 | 5.9E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 583 | 604 | 0.26 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 274 | 332 | 2.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 510 | 570 | 2.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 402 | 606 | 4.42E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 693 | 977 | 1.48E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 384 | 1.97E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 681 | 778 | 2.2E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 397 | 635 | 1.9E-58 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 90 | 1.4E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 91 | 229 | 6.5E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 230 | 395 | 4.8E-46 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 779 | 995 | 4.1E-62 | - |
| SMART | SM00369 | LRR_typ_2 | 272 | 295 | 3.7 | IPR003591 |
| SMART | SM00220 | serkin_6 | 699 | 981 | 2.4E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 509 | 533 | 98.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 580 | 603 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 151 | 175 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 319 | 342 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 439 | 463 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 310.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 981 | 37.21978 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 728 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 828 | 840 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_006366693.1 | PREDICTED: receptor-like protein kinase HSL1 [Solanum tuberosum] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 0 | |
| TrEMBL | M1ACJ1 | Serine-threonine protein kinase, plant-type OS=Solanum tuberosum OX=4113 GN=102601029 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology