Basic Information
Locus ID:
gene-LOC132635834
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 34115768 | 34120123 | + | gene-LOC132635834 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 53,798.65 Da | 45.24 | 96.84 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 89 | 144 | 3.3E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 48 | 82 | 1.4E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 351 | 443 | 1.4E-15 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 159 | 217 | 2.0E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 444 | 5.48E-22 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 252 | 9.07E-44 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 335 | 466 | 1.2E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 151 | 1.8E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 266 | 2.4E-26 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 349 | 475 | 14.124826 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 206 | 229 | 7.080498 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 355 | 378 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 183 | 196 | 3.4E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 204 | 217 | 3.4E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_016491033.1 | PREDICTED: receptor-like protein kinase HSL1 [Nicotiana tabacum] | 0 |
| Q8GRU6 | Leucine-rich repeat receptor-like kinase protein HAR1 OS=Lotus japonicus OX=34305 GN=HAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4BQF8 | receptor-like protein kinase HSL1 OS=Nicotiana tabacum OX=4097 GN=LOC107810738 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology