Basic Information
Locus ID:
gene-LOC132635590
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 23908811 | 23916604 | - | gene-LOC132635590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 72,424.56 Da | 37.93 | 90.26 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 125 | 184 | 1.9E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 333 | 597 | 4.6E-31 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 72 | 6.5E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 333 | 606 | 3.74E-50 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 233 | 4.54E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 297 | 405 | 3.9E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 406 | 627 | 4.9E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 235 | 4.1E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 194 | 3.8E-31 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 329 | 605 | 27.241177 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 26 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 301 | - | - |
| Coils | Coil | Coil | 595 | 615 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_009762626.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g31250 [Nicotiana sylvestris] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4D1C3 | pollen receptor-like kinase 4 OS=Nicotiana tabacum OX=4097 GN=LOC107824767 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology