Basic Information
Locus ID:
gene-LOC132635513
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 21088804 | 21098287 | + | gene-LOC132635513 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 42,958.69 Da | 48.57 | 70.24 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 317 | 365 | 5.3E-10 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 310 | 371 | 6.56E-17 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 43 | 252 | 2.79E-24 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 42 | 257 | 4.2E-11 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 300 | 381 | 1.7E-18 | - |
| SMART | SM00326 | SH3_2 | 313 | 368 | 9.7E-13 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 310 | 369 | 20.879091 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 276 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_016573594.1 | SH3 domain-containing protein 2 isoform X3 [Capsicum annuum] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2XMJ4 | SH3 domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_01079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology