Basic Information
Locus ID:
gene-LOC132635286
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 14244107 | 14246576 | - | gene-LOC132635286 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 72,679.83 Da | 48.81 | 65.96 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 480 | 556 | 3.39473E-49 | - |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 86 | 269 | 2.5E-53 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 487 | 532 | 1.4E-10 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 486 | 553 | 6.41E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 475 | 562 | 5.7E-18 | IPR036638 |
| SMART | SM00353 | finulus | 489 | 538 | 1.4E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 483 | 532 | 17.389959 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 398 | 493 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 493 | - | - |
| Coils | Coil | Coil | 529 | 563 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_015085364.1 | transcription factor MYC2-like [Solanum pennellii] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AXT3 | BHLH domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_022314 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology