Basic Information
Locus ID:
gene-LOC132634959
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 5458840 | 5465827 | - | gene-LOC132634959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 85,651.78 Da | 51.80 | 77.03 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 502 | 748 | 1.44636E-122 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 497 | 747 | 5.2E-67 | IPR001245 |
| Pfam | PF13426 | PAS domain | 101 | 191 | 6.8E-11 | IPR000014 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 83 | 191 | 2.44E-14 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 472 | 745 | 6.74E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 93 | 194 | 2.4E-17 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 489 | 573 | 2.7E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 575 | 755 | 5.5E-59 | - |
| SMART | SM00091 | pas_2 | 81 | 148 | 2.7E-4 | IPR000014 |
| SMART | SM00220 | serkin_6 | 496 | 752 | 3.8E-55 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 83 | 191 | 2.0E-11 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 496 | 753 | 41.884003 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 79 | 125 | 12.002666 | IPR000014 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 502 | 523 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 615 | 627 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 609 | 627 | 2.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 719 | 741 | 2.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 675 | 697 | 2.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 570 | 583 | 2.5E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 656 | 666 | 2.5E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 477 | - | - |
| Coils | Coil | Coil | 31 | 51 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_019267637.1 | PREDICTED: serine/threonine-protein kinase A-Raf-like [Nicotiana attenuata] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A314KY59 | Serinethreonine-protein kinase edr1 OS=Nicotiana attenuata OX=49451 GN=EDR1_3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology