Basic Information
Locus ID:
gene-LOC132634829
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
BTB POZ domain-containing protein POB1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 2532818 | 2540321 | - | gene-LOC132634829 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 62,819.89 Da | 50.02 | 80.73 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 147 | 221 | 3.19993E-13 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 263 | 354 | 7.9E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 148 | 234 | 8.1E-13 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 148 | 235 | 4.08E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 434 | 549 | 1.44E-6 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 424 | 550 | 1.5E-5 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 271 | 376 | 9.4E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 132 | 270 | 4.4E-17 | IPR011333 |
| SMART | SM00875 | BACK_2 | 251 | 355 | 2.0E-6 | IPR011705 |
| SMART | SM00225 | BTB_4 | 134 | 238 | 2.5E-7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 138 | 207 | 11.729739 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 141 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_009772687.1 | PREDICTED: BTB/POZ domain-containing protein POB1-like [Nicotiana sylvestris] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1U7VY40 | BTB/POZ domain-containing protein POB1-like OS=Nicotiana sylvestris OX=4096 GN=LOC104223035 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology