Basic Information
Locus ID:
gene-LOC132634695
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 208730 | 217959 | - | gene-LOC132634695 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 105,495.86 Da | 46.08 | 80.95 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 763 | 916 | 2.77825E-60 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 319 | 915 | 3.2E-87 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 39 | 143 | 1.3E-22 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 316 | 918 | 7.85E-114 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 15 | 143 | 1.03E-25 | IPR035927 |
| Gene3D | G3DSA:3.10.20.90 | - | 156 | 243 | 4.1E-9 | - |
| Gene3D | G3DSA:3.30.2230.10 | - | 7 | 155 | 5.6E-33 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 302 | 539 | 4.1E-69 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 672 | 926 | 3.1E-59 | - |
| SMART | SM00695 | dusp | 35 | 146 | 6.9E-26 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 16 | 143 | 18.922571 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 318 | 918 | 57.72752 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 860 | 877 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 319 | 334 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_049377926.1 | ubiquitin carboxyl-terminal hydrolase 9-like isoform X1 [Solanum stenotomum] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6N2BHR4 | Ubiquitin carboxyl-terminal hydrolase OS=Solanum chilense OX=4083 GN=EJD97_012953 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology