Basic Information
Locus ID:
gene-LOC132634398
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 149119971 | 149123227 | - | gene-LOC132634398 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 80,672.67 Da | 37.16 | 92.17 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 191 | 251 | 2.9E-10 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 92 | 138 | 3.0E-7 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 263 | 282 | 1.6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 453 | 713 | 1.4E-28 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 124 | 283 | 1.66E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 454 | 718 | 1.54E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 527 | 731 | 9.5E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 93 | 209 | 3.9E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 262 | 307 | 6.4E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 261 | 3.3E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 416 | 525 | 1.2E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 450 | 719 | 26.025654 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_019243961.1 | PREDICTED: pollen receptor-like kinase 1 [Nicotiana attenuata] | 0 |
| Q40902 | Pollen receptor-like kinase 1 OS=Petunia integrifolia OX=4103 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J6J5M1 | Pollen receptor-like kinase 4 OS=Nicotiana attenuata OX=49451 GN=PRK4_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology