Basic Information
Locus ID:
gene-LOC132634357
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-box kelch-repeat protein At1g80440-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 145262369 | 145263730 | - | gene-LOC132634357 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 40,423.85 Da | 38.07 | 79.22 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 171 | 203 | 2.9E-5 | IPR006652 |
| Pfam | PF00646 | F-box domain | 4 | 41 | 4.8E-4 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 111 | 154 | 2.7E-8 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 77 | 319 | 4.45E-38 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 1 | 97 | 5.89E-8 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 58 | 283 | 1.8E-32 | IPR015915 |
| SMART | SM00612 | kelc_smart | 119 | 167 | 0.31 | IPR006652 |
| SMART | SM00612 | kelc_smart | 170 | 217 | 0.0046 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_016445878.1 | PREDICTED: F-box/kelch-repeat protein At1g80440-like [Nicotiana tabacum] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1S3Y0Y9 | F-box/kelch-repeat protein At1g80440-like OS=Nicotiana tabacum OX=4097 GN=LOC107771069 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology