Basic Information
Locus ID:
gene-LOC132633907
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 30316161 | 30323216 | - | gene-LOC132633907 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 73,221.78 Da | 40.27 | 76.62 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 13 | 268 | 3.32871E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 14 | 267 | 5.6E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 296 | 9.85E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 277 | 2.1E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 93 | 8.2E-24 | - |
| SMART | SM00220 | serkin_6 | 14 | 268 | 1.2E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 272 | 47.042912 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 135 | 147 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 449 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 465 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 420 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_006361383.1 | PREDICTED: serine/threonine-protein kinase Nek6-like [Solanum tuberosum] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | M1D7R1 | ATP binding protein OS=Solanum tuberosum OX=4113 GN=102604353 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology