Basic Information
Locus ID:
gene-LOC132633573
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
CAX2
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 148650868 | 148658294 | - | gene-LOC132633573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 47,571.31 Da | 37.31 | 114.91 | 0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 280 | 419 | 7.4E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 90 | 247 | 8.2E-20 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 121 | 264 | 4.4E-15 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 267 | 423 | 4.0E-19 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 63 | 422 | 4.1E-118 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 73 | 422 | 2.1E-103 | IPR004798 |
| Coils | Coil | Coil | 250 | 270 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_009759320.1 | PREDICTED: vacuolar cation/proton exchanger 2-like [Nicotiana sylvestris] | 0 |
| Q5KQN0 | Vacuolar cation/proton exchanger 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1U7VBW9 | Vacuolar cation/proton exchanger OS=Nicotiana sylvestris OX=4096 GN=LOC104211880 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology