Basic Information
Locus ID:
gene-LOC132633348
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 145253675 | 145255574 | - | gene-LOC132633348 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 40,067.34 Da | 35.18 | 72.76 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 119 | 153 | 7.2E-8 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 169 | 202 | 3.3E-7 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 47 | 4.45E-5 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 81 | 338 | 6.41E-38 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 55 | 4.7E-5 | - |
| Gene3D | G3DSA:2.120.10.80 | - | 77 | 349 | 2.5E-35 | IPR015915 |
| SMART | SM00612 | kelc_smart | 118 | 167 | 0.011 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 1.1E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_006343108.1 | PREDICTED: F-box/kelch-repeat protein At1g80440-like [Solanum tuberosum] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | M0ZRN0 | F-box/kelch-repeat protein OS=Solanum tuberosum OX=4113 GN=102600996 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology