Basic Information
Locus ID:
gene-LOC132633004
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
CUE domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 140033686 | 140037787 | + | gene-LOC132633004 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 28,680.85 Da | 59.94 | 80.16 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 44 | 77 | 1.51172E-8 | - |
| Pfam | PF02845 | CUE domain | 44 | 78 | 2.5E-5 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 39 | 81 | 3.18E-8 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 36 | 83 | 1.1E-6 | - |
| ProSiteProfiles | PS51140 | CUE domain profile. | 39 | 82 | 12.130781 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 40 | - | - |
| Coils | Coil | Coil | 204 | 231 | - | - |
| Coils | Coil | Coil | 166 | 186 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_016562870.2 | uncharacterized protein LOC107861963 [Capsicum annuum] | 0 |
| TrEMBL | A0A1U8FVJ8 | uncharacterized protein LOC107861963 OS=Capsicum annuum OX=4072 GN=LOC107861963 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology