Basic Information
Locus ID:
gene-LOC132632468
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 129466636 | 129470205 | + | gene-LOC132632468 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 110,604.77 Da | 30.18 | 106.23 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 472 | 532 | 1.4E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 66 | 124 | 1.1E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 19 | 61 | 3.9E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 700 | 971 | 7.5E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 281 | 303 | 1.6 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 244 | 587 | 4.71E-67 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 60 | 341 | 3.77E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 692 | 974 | 3.64E-69 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 170 | 271 | 3.4E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 371 | 613 | 6.5E-62 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 781 | 3.1E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 169 | 2.2E-36 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 782 | 986 | 2.7E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 272 | 370 | 1.1E-30 | IPR032675 |
| SMART | SM00220 | serkin_6 | 698 | 974 | 2.1E-32 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 281 | 304 | 7.573342 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 698 | 981 | 37.700336 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 824 | 836 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 704 | 728 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 282 | 295 | 3.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 543 | 556 | 3.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_049391164.1 | leucine-rich repeat receptor-like protein kinase PXL1 [Solanum stenotomum] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B051 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_018870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology