Basic Information
Locus ID:
gene-LOC132632127
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 13116744 | 13118427 | - | gene-LOC132632127 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 53,423.54 Da | 50.19 | 84.06 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 301 | 346 | 3.1E-11 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 29 | 205 | 5.1E-57 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 299 | 364 | 7.2E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 293 | 362 | 5.7E-17 | IPR036638 |
| SMART | SM00353 | finulus | 303 | 352 | 3.8E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 297 | 346 | 16.723116 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 308 | - | - |
| Coils | Coil | Coil | 336 | 356 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46760.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. | 0 |
| RefSeq | XP_016545788.2 | transcription factor MYC2 [Capsicum annuum] | 0 |
| Q9FIP9 | Transcription factor MYC3 OS=Arabidopsis thaliana OX=3702 GN=MYC3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8EF07 | transcription factor MYC2-like OS=Capsicum annuum OX=4072 GN=LOC107845814 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology