Basic Information
Locus ID:
gene-LOC132631700
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 105072653 | 105077179 | + | gene-LOC132631700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 111,812.14 Da | 31.54 | 99.61 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 716 | 986 | 2.3E-46 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 368 | 384 | 1.5 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 179 | 197 | 1.7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 275 | 334 | 1.0E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 78 | 9.9E-7 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 289 | 613 | 2.98E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 383 | 1.12E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 716 | 988 | 3.1E-72 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 320 | 1.5E-75 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 697 | 791 | 7.6E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 792 | 1000 | 2.9E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 323 | 634 | 6.2E-84 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 105 | 128 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 177 | 200 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 297 | 321 | 2.7 | IPR003591 |
| SMART | SM00220 | serkin_6 | 713 | 992 | 1.0E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 129 | 153 | 68.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 226 | 320.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 992 | 38.166759 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 742 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_009768910.1 | PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Nicotiana sylvestris] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4B996 | leucine-rich repeat receptor-like protein kinase TDR OS=Nicotiana tabacum OX=4097 GN=LOC107805804 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology