Basic Information
Locus ID:
gene-LOC132631530
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
RING-like zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 146436455 | 146436853 | + | gene-LOC132631530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.57 | 14,867.34 Da | 41.91 | 101.21 | 0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13639 | Ring finger domain | 79 | 125 | 1.5E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 80 | 130 | 7.88E-15 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 131 | 3.7E-17 | IPR013083 |
| SMART | SM00184 | ring_2 | 81 | 124 | 4.2E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 81 | 125 | 11.972923 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G15580.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_031131824.1 | E3 ubiquitin-protein ligase AIRP1-like [Ipomoea triloba] | 0 |
| P0C034 | RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8J5S4I7 | RING-type domain-containing protein OS=Zizania palustris OX=103762 GN=GUJ93_ZPchr0002g23046 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology