Basic Information
Locus ID:
gene-LOC132631218
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 55528475 | 55541396 | + | gene-LOC132631218 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 105,642.53 Da | 39.54 | 92.97 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 629 | 895 | 1.54428E-89 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 3.2E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 626 | 892 | 2.5E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 608 | 918 | 4.78E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 42 | 388 | 2.04E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 266 | 2.9E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 595 | 698 | 6.0E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 267 | 367 | 7.2E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 192 | 1.8E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 699 | 908 | 9.1E-58 | - |
| SMART | SM00220 | serkin_6 | 623 | 895 | 1.2E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 623 | 896 | 39.071335 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 743 | 755 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 629 | 651 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_009621385.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Nicotiana tomentosiformis] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1U8EEH7 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 OS=Capsicum annuum OX=4072 GN=LOC107842404 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology