Basic Information
Locus ID:
gene-LOC132631075
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 8671761 | 8681217 | + | gene-LOC132631075 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.88 | 48,408.44 Da | 37.26 | 90.67 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 235 | 365 | 4.3E-14 | IPR013187 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 281 | 383 | 2.48E-5 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 50 | 120 | 2.62E-5 | IPR036047 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 136 | 371 | 2.7E-23 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16220.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_033508035.1 | F-box protein At4g19940-like [Nicotiana tomentosiformis] | 0 |
| Q8S8C7 | Putative F-box protein At2g16220 OS=Arabidopsis thaliana OX=3702 GN=At2g16220 PE=4 SV=1 | 0 | |
| TrEMBL | A0A1S3XT18 | F-box/kelch-repeat protein At4g19930-like OS=Nicotiana tabacum OX=4097 GN=LOC107768413 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 6 | gene-LOC132601342, gene-LOC132609287, gene-LOC132631037 ... |