Basic Information
Locus ID:
gene-LOC132631045
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 8647465 | 8648918 | - | gene-LOC132631045 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 48,495.61 Da | 38.35 | 93.94 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 236 | 363 | 2.5E-11 | IPR013187 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 269 | 385 | 2.09E-5 | IPR011043 |
| SUPERFAMILY | SSF81383 | F-box domain | 48 | 118 | 1.7E-8 | IPR036047 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 136 | 363 | 2.4E-20 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G19940.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_033508035.1 | F-box protein At4g19940-like [Nicotiana tomentosiformis] | 0 |
| O49421 | F-box protein At4g19940 OS=Arabidopsis thaliana OX=3702 GN=At4g19940 PE=4 SV=1 | 0 | |
| TrEMBL | A0A1S3XT18 | F-box/kelch-repeat protein At4g19930-like OS=Nicotiana tabacum OX=4097 GN=LOC107768413 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 6 | gene-LOC132601342, gene-LOC132609287, gene-LOC132631037 ... |