Basic Information
Locus ID:
gene-LOC132630080
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
L-type lectin-domain containing receptor kinase VIII.1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 7262764 | 7266042 | + | gene-LOC132630080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 75,806.64 Da | 30.89 | 90.37 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 380 | 647 | 7.63554E-93 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 21 | 251 | 3.35931E-69 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 21 | 259 | 3.0E-56 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 376 | 645 | 2.9E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 681 | 2.19E-81 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 19 | 260 | 6.06E-60 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 336 | 449 | 8.5E-32 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 262 | 1.2E-62 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 450 | 668 | 5.3E-61 | - |
| SMART | SM00220 | serkin_6 | 374 | 647 | 1.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 374 | 656 | 38.520111 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 380 | 403 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 493 | 505 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 301 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_009767145.1 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Nicotiana sylvestris] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1S3ZYT9 | L-type lectin-domain containing receptor kinase VIII.1-like OS=Nicotiana tabacum OX=4097 GN=LOC107791901 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology