Basic Information
Locus ID:
gene-LOC132629932
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 3093630 | 3101050 | + | gene-LOC132629932 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 59,825.33 Da | 37.54 | 81.78 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14136 | STKc_SRPK | 49 | 466 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 60 | 200 | 1.2E-18 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 303 | 466 | 7.7E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 479 | 4.27E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 35 | 142 | 3.6E-39 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 143 | 467 | 1.6E-77 | - |
| SMART | SM00220 | serkin_6 | 60 | 466 | 4.7E-53 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 466 | 31.424841 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 89 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 187 | 199 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 278 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53030.1 | ser/arg-rich protein kinase 4. Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31. | 0 |
| RefSeq | XP_049406825.1 | uncharacterized protein LOC125870431 isoform X2 [Solanum stenotomum] | 0 |
| P36616 | Protein kinase dsk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dsk1 PE=3 SV=2 | 0 | |
| TrEMBL | A0A0V0ITS0 | Putative SRSF protein kinase 1-like OS=Solanum chacoense OX=4108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology