Basic Information
Locus ID:
gene-LOC132629907
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
CTR1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 2552332 | 2570506 | - | gene-LOC132629907 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 92,051.31 Da | 51.77 | 86.01 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 563 | 811 | 1.65118E-125 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 168 | 374 | 2.8E-81 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 558 | 811 | 5.9E-70 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 545 | 811 | 2.02E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 550 | 635 | 4.0E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 636 | 819 | 7.2E-64 | - |
| SMART | SM00220 | serkin_6 | 557 | 815 | 7.3E-69 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 557 | 815 | 46.378613 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 563 | 584 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 678 | 690 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 738 | 760 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 631 | 644 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 719 | 729 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 672 | 690 | 1.2E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 782 | 804 | 1.2E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 442 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 459 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_009621023.1 | serine/threonine-protein kinase CTR1 isoform X1 [Nicotiana tomentosiformis] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S3YS63 | serine/threonine-protein kinase CTR1 isoform X2 OS=Nicotiana tabacum OX=4097 GN=LOC107779190 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology