Basic Information
Locus ID:
gene-LOC132629441
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12933818 | 12936390 | + | gene-LOC132629441 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 45,983.29 Da | 38.45 | 79.85 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 244 | 291 | 1.1E-10 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 70 | 160 | 8.1E-26 | IPR025610 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 25 | 67 | 1.5E-12 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 241 | 309 | 6.94E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 233 | 321 | 1.9E-17 | IPR036638 |
| SMART | SM00353 | finulus | 248 | 297 | 5.5E-14 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 242 | 291 | 16.240446 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 210 | - | - |
| Coils | Coil | Coil | 281 | 315 | - | - |
| Coils | Coil | Coil | 241 | 261 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_016462596.1 | PREDICTED: transcription factor MYC2-like [Nicotiana tabacum] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S3ZE82 | transcription factor MYC2-like OS=Nicotiana tabacum OX=4097 GN=LOC107785741 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology