Basic Information
Locus ID:
gene-LOC132629201
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1450798 | 1461003 | + | gene-LOC132629201 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 72,285.90 Da | 38.61 | 86.97 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 328 | 597 | 2.04543E-88 | - |
| Pfam | PF00069 | Protein kinase domain | 323 | 532 | 5.4E-45 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 41 | 128 | 6.3E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 146 | 237 | 1.2E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 307 | 618 | 7.01E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 282 | 397 | 9.3E-32 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 141 | 240 | 3.9E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 28 | 130 | 7.0E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 398 | 605 | 2.2E-57 | - |
| SMART | SM00220 | serkin_6 | 322 | 599 | 1.5E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 598 | 37.629669 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 130 | 15.909515 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 135 | 240 | 15.121983 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 443 | 455 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 350 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_006348519.1 | PREDICTED: cysteine-rich receptor-like protein kinase 2 [Solanum tuberosum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2XSC5 | Cysteine-rich receptor-like protein kinase 2 OS=Capsicum baccatum OX=33114 GN=CQW23_02741 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology