Basic Information
Locus ID:
gene-LOC132628912
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 130859155 | 130860288 | - | gene-LOC132628912 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 43,341.90 Da | 44.94 | 90.50 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 216 | 310 | 6.6E-5 | IPR013187 |
| Pfam | PF00646 | F-box domain | 4 | 42 | 9.7E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 83 | 4.71E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 39 | 2.6E-5 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 107 | 308 | 2.8E-20 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015081539.2 | putative F-box protein At1g47300 [Solanum pennellii] | 0 |
| TrEMBL | A0A6N2BYV5 | F-box domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_003612 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 3 | gene-LOC132619443, gene-LOC132619444, gene-LOC132628912 |
| Solanaceae | Solanum chilense | 3 | SOLCI001075800, SOLCI004757200, SOLCI004757300 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107019849, gene-LOC107025258, gene-LOC107026181 |