HalophFGD

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Basic Information
Locus ID: gene-LOC132628338
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: F-box FBD LRR-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr2 10615875 10617276 + gene-LOC132628338
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.96 42,857.18 Da 42.22 114.16 0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52047 RNI-like 76 352 1.73E-9 -
SUPERFAMILY SSF81383 F-box domain 14 79 4.32E-7 IPR036047
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 74 369 4.4E-10 IPR032675
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_019264910.1 PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X1 [Nicotiana attenuata] 0
TrEMBL A0A314L4J4 F-boxfbd/lrr-repeat protein OS=Nicotiana attenuata OX=49451 GN=A4A49_15599 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Salicaceae Populus euphratica 1 populus_peu17759
Solanaceae Lycium barbarum 8 gene-LOC132601437, gene-LOC132628337, gene-LOC132628338 ...
gene-LOC132630257, gene-LOC132640169, gene-LOC132641237, gene-LOC132642201, gene-LOC132642651
Solanaceae Solanum pennellii 2 gene-LOC107020257, gene-LOC107020267
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.