Basic Information
Locus ID:
gene-LOC132628157
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 151532400 | 151541224 | + | gene-LOC132628157 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.42 | 47,278.43 Da | 38.77 | 107.61 | 0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 11 | 419 | 1.61802E-53 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 11 | 379 | 2.8E-28 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 11 | 413 | 1.57E-40 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 8 | 416 | 6.6E-42 | IPR036259 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 19 | 5.0 | - |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 7 | 425 | 11.675243 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 363 | 386 | 1.5E-8 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 328 | 348 | 1.5E-8 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 303 | 324 | 1.5E-8 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 51 | 70 | 1.5E-8 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_009620054.1 | tetracycline resistance protein, class A-like [Nicotiana tomentosiformis] | 0 |
| Q5SR56 | Hippocampus abundant transcript-like protein 1 OS=Homo sapiens OX=9606 GN=MFSD14B PE=1 SV=3 | 0 | |
| TrEMBL | A0A1S4BX06 | tetracycline resistance protein, class A-like OS=Nicotiana tabacum OX=4097 GN=LOC107812780 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology