Basic Information
Locus ID:
gene-LOC132627857
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 145628264 | 145634812 | + | gene-LOC132627857 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 60,611.44 Da | 47.63 | 79.77 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 109 | 478 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 433 | 477 | 1.9E-5 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 111 | 414 | 1.6E-63 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 87 | 468 | 2.29E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 194 | 2.3E-68 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 195 | 262 | 2.3E-68 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 313 | 432 | 7.2E-41 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 433 | 443 | 7.2E-41 | - |
| SMART | SM00220 | serkin_6 | 111 | 414 | 1.6E-101 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 415 | 479 | 3.9E-9 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 415 | 487 | 13.942768 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 111 | 414 | 46.760231 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 230 | 242 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 117 | 140 | - | IPR017441 |
| Coils | Coil | Coil | 81 | 101 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G09890.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_016568758.1 | serine/threonine-protein kinase tricornered [Capsicum annuum] | 0 |
| Q2LZZ7 | Serine/threonine-protein kinase tricornered OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=trc PE=3 SV=1 | 0 | |
| TrEMBL | A0A2G3CPZ1 | Serine/threonine-protein kinase tricorner OS=Capsicum chinense OX=80379 GN=BC332_11954 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology