Basic Information
Locus ID:
gene-LOC132627796
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
CBL02
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 578304 | 586629 | - | gene-LOC132627796 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 25,500.58 Da | 42.10 | 88.29 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13833 | EF-hand domain pair | 60 | 105 | 0.0012 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 118 | 187 | 1.4E-8 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 29 | 214 | 1.79E-46 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 28 | 222 | 1.7E-70 | - |
| SMART | SM00054 | efh_1 | 82 | 110 | 1.4 | IPR002048 |
| SMART | SM00054 | efh_1 | 163 | 191 | 0.051 | IPR002048 |
| SMART | SM00054 | efh_1 | 119 | 147 | 26.0 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 78 | 113 | 11.807551 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 159 | 194 | 12.309669 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 115 | 150 | 9.743292 | IPR002048 |
| PRINTS | PR00450 | Recoverin family signature | 179 | 199 | 3.9E-6 | - |
| PRINTS | PR00450 | Recoverin family signature | 133 | 151 | 3.9E-6 | - |
| PRINTS | PR00450 | Recoverin family signature | 86 | 107 | 3.9E-6 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26570.1 | calcineurin B-like 3. member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins) | 0 |
| RefSeq | XP_047254285.1 | calcineurin B-like protein 3 [Capsicum annuum] | 0 |
| Q75LU8 | Calcineurin B-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CBL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G3BC91 | Calcineurin B-like protein OS=Capsicum chinense OX=80379 GN=BC332_24908 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology