Basic Information
Locus ID:
gene-LOC132627675
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 141716010 | 141721684 | + | gene-LOC132627675 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 36,181.68 Da | 48.84 | 69.50 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 72 | 328 | 3.5E-92 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 215 | 318 | 4.91E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 212 | 330 | 1.4E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 217 | 319 | 26.565369 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 180 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_016568988.2 | auxin-responsive protein IAA8 [Capsicum annuum] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G3CPD9 | Auxin-responsive protein OS=Capsicum chinense OX=80379 GN=BC332_11718 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology