Basic Information
Locus ID:
gene-LOC132627640
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 140832054 | 140840214 | - | gene-LOC132627640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 108,581.81 Da | 44.24 | 81.57 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 703 | 951 | 3.00653E-130 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 697 | 951 | 1.7E-65 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 301 | 509 | 8.9E-75 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 950 | 2.73E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 776 | 961 | 2.0E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 690 | 774 | 1.4E-35 | - |
| SMART | SM00220 | serkin_6 | 697 | 955 | 1.7E-55 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 697 | 955 | 43.580082 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 703 | 724 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 818 | 830 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 771 | 784 | 2.3E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 878 | 900 | 2.3E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 812 | 830 | 2.3E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 922 | 944 | 2.3E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 172 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 63 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.2 | - | 0 |
| RefSeq | XP_006338041.1 | PREDICTED: serine/threonine-protein kinase CTR1 [Solanum tuberosum] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | M1AJJ4 | Map3k delta-1 protein kinase OS=Solanum tuberosum OX=4113 GN=102601301 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology