Basic Information
Locus ID:
gene-LOC132627578
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 139210074 | 139211681 | + | gene-LOC132627578 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 38,657.18 Da | 67.57 | 77.59 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 150 | 192 | 3.1823E-17 | - |
| Pfam | PF13639 | Ring finger domain | 149 | 192 | 1.6E-13 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 144 | 199 | 1.89E-21 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 126 | 199 | 8.6E-22 | IPR013083 |
| SMART | SM00184 | ring_2 | 150 | 191 | 1.8E-7 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 150 | 192 | 12.917115 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 310 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33565.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_049392092.1 | RING-H2 finger protein ATL54-like [Solanum stenotomum] | 0 |
| Q8LFY8 | RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6N2B5Z8 | RING-type E3 ubiquitin transferase OS=Solanum chilense OX=4083 GN=EJD97_019998 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology