Basic Information
Locus ID:
gene-LOC132627427
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 121941 | 126867 | - | gene-LOC132627427 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 47,163.83 Da | 49.51 | 94.66 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 130 | 320 | 1.5E-34 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 329 | 401 | 6.6E-12 | IPR027470 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 325 | 401 | 1.18E-14 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 123 | 322 | 3.92E-43 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 125 | 320 | 1.6E-45 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 326 | 402 | 9.2E-16 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 128 | 401 | 8.0E-35 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79520.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_049356651.1 | metal tolerance protein 9-like [Solanum verrucosum] | 0 |
| Q9SAJ7 | Metal tolerance protein 9 OS=Arabidopsis thaliana OX=3702 GN=MTP9 PE=3 SV=2 | 0 | |
| TrEMBL | A0A1U7VML5 | metal tolerance protein 9-like OS=Nicotiana sylvestris OX=4096 GN=LOC104215062 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology