Basic Information
Locus ID:
gene-LOC132627398
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
MRN-interacting protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 134673947 | 134676713 | + | gene-LOC132627398 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.85 | 34,431.82 Da | 43.63 | 58.52 | -0.91 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71760.2 | 0 | |
| RefSeq | XP_006359023.1 | PREDICTED: UPF0544 protein C5orf45 homolog [Solanum tuberosum] | 0 |
| TrEMBL | A0A0V0HSZ6 | Putative UPF0544 protein C5orf45-like OS=Solanum chacoense OX=4108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg11460 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_921 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah024713, Ah039106 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_1g012360 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31720, Sbi_jg57582 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25261 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00025107 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl54183, Sgl59489, Sgl59525, Sgl71632 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000035976, gene:ENSEOMG00000050453 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1AG0015530, CQ.Regalona.r1.1BG0010200 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30283310 |
| Apiaceae | Apium graveolens | 1 | Ag3G01794 |
| Arecaceae | Cocos nucifera | 1 | scaffold067243G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120110420 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.2974.V1.1 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G71760.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10019840m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp5g26780.v2.2, SpUn0095_0010.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g049580.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G1490 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g00660 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1127s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate03g19300 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.1611 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00023109 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.2977, BH02.3056, CH02.3467 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0031130, gene-QOZ80_1BG0081080 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0285010.1 |
| Poaceae | Oryza coarctata | 2 | Oco01G018750, Oco02G019190 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g51850.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G256300, gene-BS78_04G089800 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0602910 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr03G014940, Chr08G015050 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G418000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG036330, gene_TRIDC3BG041450 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G244200.1, TraesCS3B02G275800.3 ... |
| Poaceae | Zea mays | 1 | Zm00001eb361480_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-26301 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g11013 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG01.1056, evm.TU.LG17.1178 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g10910 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.437 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-9821 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-2274 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-18027 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000018l.715 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003607 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-18029 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11192 |
| Salicaceae | Populus euphratica | 1 | populus_peu32607 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132627398 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107016206 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.10064_chr06_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC04G1392 |
| Zosteraceae | Zostera marina | 1 | Zosma05g14360.v3.1 |