Basic Information
Locus ID:
gene-LOC132627248
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 130522631 | 130532898 | - | gene-LOC132627248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 27,746.56 Da | 56.42 | 64.37 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 182 | 230 | 5.3E-10 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 19 | 127 | 5.49E-8 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 173 | 237 | 1.04E-15 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 164 | 246 | 5.7E-17 | - |
| SMART | SM00326 | SH3_2 | 178 | 233 | 7.6E-11 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 175 | 234 | 18.81768 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 151 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 130 | 166 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G31440.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_016573594.1 | SH3 domain-containing protein 2 isoform X3 [Capsicum annuum] | 0 |
| Q9C865 | SH3 domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=SH3P1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2XMJ4 | SH3 domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_01079 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology