Basic Information
Locus ID:
gene-LOC132627090
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 125345112 | 125356975 | + | gene-LOC132627090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 178,431.17 Da | 45.82 | 78.55 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 1285 | 1546 | 2.64264E-132 | IPR044769 |
| CDD | cd03334 | Fab1_TCP | 177 | 429 | 1.89856E-96 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1493 | 1544 | 3.0E-8 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 171 | 426 | 1.6E-25 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1324 | 1489 | 1.0E-33 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1267 | 1546 | 9.15E-78 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 228 | 396 | 4.97E-26 | IPR027409 |
| SUPERFAMILY | SSF54849 | GroEL-intermediate domain like | 177 | 420 | 3.36E-6 | IPR027410 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 227 | 396 | 1.8E-34 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1407 | 1547 | 5.3E-40 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1240 | 1405 | 6.4E-34 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1258 | 1547 | 8.9E-88 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1226 | 1546 | 54.55761 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1575 | 1603 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1580 | 1597 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1072 | 1106 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G34260.1 | FORMS APLOID AND BINUCLEATE CELLS 1A. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_016569961.1 | putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D isoform X1 [Capsicum annuum] | 0 |
| Q9XID0 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D OS=Arabidopsis thaliana OX=3702 GN=FAB1D PE=3 SV=1 | 0 | |
| TrEMBL | A0A2G2ZNA1 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Capsicum annuum OX=4072 GN=LOC107867960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology