Basic Information
Locus ID:
gene-LOC132626410
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 34402320 | 34404144 | - | gene-LOC132626410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 41,908.91 Da | 46.29 | 89.54 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 6 | 48 | 1.44E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 4 | 51 | 1.5E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18380.1 | F-box family protein. | 0 |
| RefSeq | XP_019249415.1 | PREDICTED: F-box protein At1g30200-like [Nicotiana attenuata] | 0 |
| O49508 | F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1J6JN56 | F-box protein OS=Nicotiana attenuata OX=49451 GN=A4A49_14937 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg35596, jg8531 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_9979 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g073490 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg17847, Sbi_jg62472 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1046 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007188 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000008296, gene:ENSEOMG00000030339 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0002060, CQ.Regalona.r1.4BG0002140 |
| Asteraceae | Flaveria trinervia | 1 | Ftri6G15419 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00017226 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G15666 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.583, evm.TU.LG08.1756, evm.TU.LG11.867 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132626410 |