Basic Information
Locus ID:
gene-LOC132626325
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 20984067 | 20993637 | - | gene-LOC132626325 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 107,611.93 Da | 49.45 | 69.36 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 7 | 262 | 9.02332E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 8 | 262 | 2.1E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 303 | 2.43E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 87 | 1.0E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 90 | 336 | 6.1E-61 | - |
| SMART | SM00220 | serkin_6 | 8 | 262 | 4.3E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 8 | 262 | 47.085312 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 14 | 37 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 895 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 543 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 750 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 558 | 576 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 729 | 757 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 395 | 458 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44200.1 | NIMA (never in mitosis, gene A)-related 6. Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules. | 0 |
| RefSeq | XP_006362627.1 | PREDICTED: serine/threonine-protein kinase Nek5-like [Solanum tuberosum] | 0 |
| Q0WPH8 | Serine/threonine-protein kinase Nek5 OS=Arabidopsis thaliana OX=3702 GN=NEK5 PE=1 SV=1 | 0 | |
| TrEMBL | M1B6G7 | ATP binding protein OS=Solanum tuberosum OX=4113 GN=102589178 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology