Basic Information
Locus ID:
gene-LOC132626076
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
WRKY4
Description:
WRKY transcription factor 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 8971639 | 8977191 | + | gene-LOC132626076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 51,790.70 Da | 59.01 | 57.92 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 198 | 254 | 2.6E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 366 | 423 | 1.0E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 195 | 256 | 1.28E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 357 | 425 | 6.15E-30 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 189 | 257 | 7.8E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 350 | 426 | 1.6E-36 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 365 | 424 | 3.9E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 197 | 255 | 6.6E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 192 | 256 | 24.351662 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 360 | 425 | 39.054211 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 345 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 272 | 310 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_019262739.1 | PREDICTED: probable WRKY transcription factor 4 [Nicotiana attenuata] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A314L972 | Putative wrky transcription factor 4 OS=Nicotiana attenuata OX=49451 GN=WRKY4_2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology