Basic Information
Locus ID:
gene-LOC132626062
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Glucan endo-1,3-beta-glucosidase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 8418820 | 8425758 | - | gene-LOC132626062 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 53,292.81 Da | 39.60 | 81.18 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 28 | 348 | 6.1E-79 | IPR000490 |
| Pfam | PF07983 | X8 domain | 363 | 434 | 1.7E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 28 | 348 | 3.55E-81 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 357 | 452 | 2.3E-10 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 27 | 353 | 5.8E-112 | - |
| SMART | SM00768 | X8_cls | 362 | 447 | 2.8E-46 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_019260657.1 | PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Nicotiana attenuata] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A314LEL4 | Glucan endo-1,3-beta-glucosidase 4 OS=Nicotiana attenuata OX=49451 GN=A4A49_31387 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology