Basic Information
Locus ID:
gene-LOC132625801
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unchr_scaffold_99 | 5208 | 8297 | + | gene-LOC132625801 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 72,381.53 Da | 34.85 | 90.41 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 382 | 645 | 3.67186E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 128 | 187 | 9.0E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 379 | 640 | 7.1E-40 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 75 | 2.4E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 220 | 2.27E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 380 | 646 | 6.6E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 451 | 659 | 2.4E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 450 | 5.0E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 149 | 6.5E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 150 | 246 | 1.5E-18 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 376 | 646 | 33.149189 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 382 | 404 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 329 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_019243992.1 | PREDICTED: probable inactive receptor kinase At1g48480 [Nicotiana attenuata] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J6IKC8 | Putative inactive receptor kinase OS=Nicotiana attenuata OX=49451 GN=RKL1_1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology