Basic Information
Locus ID:
gene-LOC132625746
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| unchr_scaffold_62 | 27 | 4109 | + | gene-LOC132625746 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 62,092.01 Da | 49.16 | 78.53 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 11 | 215 | 1.1E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 250 | 1.21E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 9 | 211 | 8.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 23 | 42 | 8.1E-59 | - |
| SMART | SM00220 | serkin_6 | 5 | 216 | 1.3E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 220 | 36.979504 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 83 | 95 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 336 | 356 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12200.4 | - | 0 |
| RefSeq | XP_049376009.1 | serine/threonine-protein kinase Nek6-like isoform X2 [Solanum verrucosum] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 0 | |
| TrEMBL | M1C6K5 | Kinase family protein OS=Solanum tuberosum OX=4113 GN=102592470 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology