Basic Information
Locus ID:
gene-LOC132625692
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1545735 | 1549978 | + | gene-LOC132625692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.01 | 71,425.87 Da | 35.11 | 91.45 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 326 | 597 | 6.81741E-90 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 144 | 235 | 2.6E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 50 | 126 | 1.6E-10 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 321 | 529 | 3.0E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 305 | 615 | 1.48E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 139 | 238 | 1.1E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 32 | 128 | 3.5E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 280 | 395 | 1.2E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 396 | 604 | 1.7E-58 | - |
| SMART | SM00220 | serkin_6 | 320 | 597 | 1.1E-33 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 133 | 238 | 14.723691 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 27 | 128 | 15.257765 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 320 | 611 | 38.265697 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 326 | 348 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 441 | 453 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_016537386.1 | cysteine-rich receptor-like protein kinase 2 [Capsicum annuum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8DTA0 | cysteine-rich receptor-like protein kinase 2 OS=Capsicum annuum OX=4072 GN=LOC107838727 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology