Basic Information
Locus ID:
gene-LOC132625663
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1276824 | 1283310 | + | gene-LOC132625663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.03 | 72,416.05 Da | 31.22 | 91.21 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 334 | 604 | 1.84539E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 331 | 602 | 5.5E-46 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 60 | 134 | 8.4E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 152 | 243 | 9.7E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 310 | 605 | 1.91E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 288 | 403 | 2.4E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 404 | 611 | 2.7E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 39 | 136 | 2.9E-13 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 147 | 246 | 2.0E-15 | IPR038408 |
| SMART | SM00220 | serkin_6 | 328 | 604 | 5.8E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 328 | 619 | 38.845192 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 35 | 136 | 15.149139 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 141 | 246 | 14.551701 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 449 | 461 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 334 | 356 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_006348519.1 | PREDICTED: cysteine-rich receptor-like protein kinase 2 [Solanum tuberosum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2YVX5 | Cysteine-rich receptor-like protein kinase 2 OS=Capsicum annuum OX=4072 GN=T459_21156 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology