Basic Information
Locus ID:
gene-LOC132625630
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1194714 | 1217894 | + | gene-LOC132625630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.04 | 72,134.50 Da | 35.71 | 88.49 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 330 | 599 | 4.11995E-87 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 44 | 130 | 7.5E-12 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 325 | 531 | 8.0E-46 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 148 | 239 | 3.3E-12 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 309 | 620 | 3.91E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 142 | 242 | 1.5E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 283 | 399 | 8.8E-33 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 30 | 132 | 4.0E-16 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 400 | 606 | 7.9E-57 | - |
| SMART | SM00220 | serkin_6 | 324 | 601 | 3.6E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 324 | 600 | 38.505974 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 31 | 132 | 16.18108 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 137 | 242 | 15.293973 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 330 | 352 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 445 | 457 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_006348519.1 | PREDICTED: cysteine-rich receptor-like protein kinase 2 [Solanum tuberosum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2XSC5 | Cysteine-rich receptor-like protein kinase 2 OS=Capsicum baccatum OX=33114 GN=CQW23_02741 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology