Basic Information
Locus ID:
gene-LOC132625120
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 89486277 | 89489694 | + | gene-LOC132625120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 57,317.65 Da | 44.16 | 88.39 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 379 | 450 | 5.9E-20 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 42 | 361 | 4.9E-76 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 42 | 361 | 1.05E-79 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 41 | 368 | 7.0E-107 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 372 | 497 | 2.4E-10 | - |
| SMART | SM00768 | X8_cls | 378 | 463 | 3.0E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 276 | 289 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_049357512.1 | glucan endo-1,3-beta-glucosidase 1 [Solanum verrucosum] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A1U7W282 | glucan endo-1,3-beta-glucosidase 1 OS=Nicotiana sylvestris OX=4096 GN=LOC104223074 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology