Basic Information
Locus ID:
gene-LOC132625114
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
RING-type zinc-finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 101831722 | 101837544 | - | gene-LOC132625114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 30,335.89 Da | 53.58 | 99.66 | 0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13445 | RING-type zinc-finger | 46 | 79 | 3.6E-8 | IPR027370 |
| SUPERFAMILY | SSF57850 | RING/U-box | 45 | 103 | 5.78E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 34 | 139 | 6.9E-12 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 46 | 101 | 9.996021 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 65 | 74 | - | IPR017907 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29270.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_009627149.1 | uncharacterized protein LOC104117763 [Nicotiana tomentosiformis] | 0 |
| TrEMBL | A0A1S3YNL4 | uncharacterized protein LOC107777864 isoform X2 OS=Nicotiana tabacum OX=4097 GN=LOC107777864 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology