Basic Information
Locus ID:
gene-LOC132624955
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 49546621 | 49550537 | + | gene-LOC132624955 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.38 | 125,431.57 Da | 33.26 | 107.55 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 169 | 189 | 0.19 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 2.0E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 850 | 1119 | 6.8E-50 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 729 | 745 | 1.7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 825 | 1122 | 4.18E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 518 | 772 | 9.98E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 326 | 9.35E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 262 | 511 | 2.27E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 406 | 2.9E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 924 | 1130 | 4.0E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 142 | 9.8E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 480 | 785 | 5.2E-85 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 407 | 479 | 5.1E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 258 | 3.8E-29 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 818 | 923 | 1.9E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 609 | 633 | 60.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 359 | 384 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 214 | 238 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 729 | 754 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 409 | 433 | 8.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 263 | 287 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 657 | 681 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 190 | 220.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 0.35 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 311 | 334 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 561 | 585 | 69.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 848 | 1128 | 8.1E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 848 | 1124 | 37.021904 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 411 | 433 | 7.134402 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 854 | 876 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 967 | 979 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47580.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_016505532.1 | PREDICTED: putative receptor-like protein kinase At3g47110 [Nicotiana tabacum] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S4CWL8 | putative receptor-like protein kinase At3g47110 OS=Nicotiana tabacum OX=4097 GN=LOC107823407 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 10 | gene-LOC132613285, gene-LOC132613458, gene-LOC132613462 ... |
| Solanaceae | Solanum chilense | 1 | SOLCI004842000 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107016360, gene-LOC107024787 |